Healthy Chocolate Muffins Recipe - Live Well Bake Often (2024)

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by Danielle on Aug 6, 2015 (updated Jan 19, 2021) 43 comments »

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4.80 from 10 ratings

These healthy chocolatemuffins are lightened up using Greek yogurt and less sugar! Perfect for quick breakfasts on the go or as a mid-morning snack.

Healthy Chocolate Muffins Recipe - Live Well Bake Often (1)

I’m excited to share this recipe with you all today! I originally posted the recipe for these healthy chocolate muffins over a year ago, when I first started blogging. Since it’s been a while, I decided to bring that recipe back to life and update the pictures and improve the recipe a little bit.

The old recipe was good, but I decided to try out a few changes and I loved how they turned out. These were too good not to share!

In the old recipe, I used applesauce to give the muffins moisture. This time around I used a little oil (only two tablespoons!) and Greek yogurt. I loved the addition of the small amount of oil and the Greek yogurt adds just a little extra protein.

I alsoused1/2 cup of sugar, but split up between 12 large muffins it’s really not too bad. The rest of the sweetness in these muffins come from the honey. I loved the combination of the two and it makes these muffins perfectly sweet.

Hope you enjoy these as much as we do!

Healthy Chocolate Muffins Recipe - Live Well Bake Often (2)

Ingredients in This Recipe

These healthy chocolate chip muffins call for pantry staples you likely have on hand already. Here is what you will need:

  • Flour:I used white whole wheat flour in these muffins, which I love to use when I’m baking a little healthier. You can substitute it cup for cup with all-purpose flour, if desired.
  • Baking powder & baking soda:Helps the muffins rise in the oven.
  • Salt:Enhances the chocolate flavor.
  • Cocoa powder:Needs to be sifted before being added to the batter.
  • Mini chocolate chips:You can use regular sized chocolate chips, if desired. I prefer using mini chips because they don’t sink to the bottom of the muffins.
  • Greek yogurt:Plain or vanilla Greek yogurt may be used.
  • Light brown sugar:Sweetens the batter and adds moisture.
  • Vanilla extract:Pure vanilla delivers the best flavor.
  • Honey:Sweetens the batter alongside the brown sugar.
  • Milk:Any type of milk will work in this recipe.
  • Oil:Vegetable, canola, or melted coconut oil will all work.
  • Egg:To help bind everything together.

How to Make Healthy Chocolate Muffins

These healthier double chocolate muffins couldn’t be easier to make! Whisk together the flour, cocoa powder, baking powder, baking soda, and salt. Then, stir in the chocolate chips. In a separate mixing bowl, whisk the Greek yogurt, brown sugar, vanilla, honey, milk, oil, and egg together until fully combined.

Add the dry ingredients to the wet ingredients and mix together until just combined. Divide the batter between 12 greased muffin cups and bake until done.

Healthy Chocolate Muffins Recipe - Live Well Bake Often (3)

How Many Calories Are in These Muffins?

I really don’t figure calories for recipes on the blog, but I did for these muffins. They come out to about 175 calories per muffin and pack about 5 grams of protein for each one! Not too bad, right?

Storage Instructions

Store leftover muffins in an airtight container in the refrigerator for up to 5 days.Muffins will also freeze well for up to two months; thaw in the microwave for 30 to 45 seconds or place in the refrigerator overnight.

Baking Tips

  • For the moistest, most flavorful muffins, I recommend using full-fat or reduced fat Greek yogurt rather than fat-free.
  • If you prefer your healthy muffins even sweeter, try adding in extra chocolate chips.
  • These muffins freeze really well and they’re great tokeep in the freezer for when a craving hits. After about 30 to 45 seconds in the microwave, they’re perfectly warm and ready to be eaten.

More Easy Muffin Recipes to Try!

  • Apple Muffins
  • Pumpkin Crumb Muffins
  • Classic Chocolate Chip Muffins
  • Banana Muffins
  • Blueberry Muffins

Healthy Chocolate Muffins Recipe - Live Well Bake Often (4)

Healthy Double Chocolate Muffins

4.80 from 10 ratings

Prep Time: 15 minutes mins

Cook Time: 15 minutes mins

Total Time: 30 minutes mins

These healthy chocolatemuffins are lightened up using Greek yogurt and less sugar! Perfect for quick breakfasts on the go or as a mid-morning snack.

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Ingredients

Servings: 12 muffins

  • 1 and 1/2 cups (190 grams) white whole wheat flour
  • 1 teaspoon baking powder
  • 1 teaspoon baking soda
  • 1/2 teaspoon salt
  • 1/2 cup (45 grams) unsweetened cocoa powder , sifted
  • 1/4 cup (50 grams) mini chocolate chips
  • 1 cup (240 grams) plain Greek yogurt (or vanilla flavor)
  • 1/2 cup (100 grams) light brown sugar
  • 1/4 cup (85 grams) honey
  • 1/2 cup ( 120 ml) milk
  • 2 tablespoons (30 ml) oil
  • 1 large egg
  • 1 teaspoon vanilla

Instructions

  • Preheat oven to 425 degrees Fahrenheit. Spray a 12-count muffin pan well with nonstick cooking spray and set aside.

  • In a large bowl, whisk together the flour, baking powder, baking soda, salt, cocoa powder, and chocolate chips.

  • In a separate bowl, mix together the Greek yogurt, brown sugar, honey, milk, oil, egg, and vanilla.

  • Add the wet ingredients to the dry ingredients and mix until just combined.

  • Evenly distribute the batter between all 12 muffin cavities.

  • Bake at 425 degrees for 5 minutes, then reduce the temperature to 375 degrees (do not remove the muffins from the oven) and continue baking for an additional 10 minutes or until a toothpick inserted into the center comes out clean.

  • Allow to cool in the pan for about 5 minutes, then remove from the muffin pan to a wire rack to finish cooling.

Notes

Storage instructions:Store leftover muffins in an airtight container in the refrigerator for up to 5 days.

Freezing instructions:Muffins will freeze well for up to two months, thaw in the microwave for 30-45 seconds or the refrigerator overnight.

Cuisine: American

Course: Breakfast

Author: Danielle

Did you make this recipe?Mention @livewellbakeoften on Instagram or tag #livewellbakeoften.

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Breakfast Healthier Options Muffins

originally published on Aug 6, 2015 (last updated Jan 19, 2021)

43 commentsLeave a comment »

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43 comments on “Skinny Double Chocolate Muffins”

  1. Healthy Chocolate Muffins Recipe - Live Well Bake Often (6)

    Sarah @Whole and Heavenly OvenReply

    Yea for skinny muffins!! Especially ones loaded with as much chocolate-y goodness as these babies! They look so moist and perfect, Danielle! I’ll take 5 dozen. 😉

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (7)

      DanielleReply

      Thanks, Sarah! 5 dozens doesn’t sound like a bad idea, either 😉

      • Healthy Chocolate Muffins Recipe - Live Well Bake Often (8)

        emilyReply

        how much fibre is in this??

        • Healthy Chocolate Muffins Recipe - Live Well Bake Often (9)

          DanielleReply

          Hi, Emily. I’m unsure of how much fiber is in this recipe. My Fitness Pal has a great app and website for calculating this information based on the products you use and can give you a more accurate estimate.

  2. Healthy Chocolate Muffins Recipe - Live Well Bake Often (10)

    Jen @ Baked by an IntrovertReply

    These muffins look phenomenal! And I can’t believe they’re skinny!! I’m betting they taste pretty spectacular.

  3. Healthy Chocolate Muffins Recipe - Live Well Bake Often (11)

    Gayle @ Pumpkin 'N SpiceReply

    Yum! You can never go wrong with anything skinny, especially when chocolate is involved. Love those mini chocolate chips, too!

  4. Healthy Chocolate Muffins Recipe - Live Well Bake Often (12)

    Medha @ Whisk & ShoutReply

    Delicious! Love the white whole wheat flour and all the delicious chocolate- I wouldn’t miss the sugar 🙂

  5. Healthy Chocolate Muffins Recipe - Live Well Bake Often (13)

    Annie @MaebellsReply

    These look delicious! The more chocolate the better, I say!

  6. Healthy Chocolate Muffins Recipe - Live Well Bake Often (14)

    Denise | Sweet Peas & SaffronReply

    175 calories is pretty amazing for a big old chocolate muffin! These look delicious, Danielle!

  7. Healthy Chocolate Muffins Recipe - Live Well Bake Often (15)

    DanielleReply

    Thank you, Mary Frances! The plate is from Pier 1 🙂

  8. Healthy Chocolate Muffins Recipe - Live Well Bake Often (16)

    Michelle { A Latte Food }Reply

    These look amazing! I love getting my chocolate fix in a skinny way!

  9. Healthy Chocolate Muffins Recipe - Live Well Bake Often (17)

    Kelly - Life Made SweeterReply

    Double chocolate and skinny sounds perfect to me! I love the Greek yogurt and white whole wheat flour in here. These muffins look amazing!

  10. Healthy Chocolate Muffins Recipe - Live Well Bake Often (18)

    Anu-My Ginger Garlic KitchenReply

    WOW! These skinny muffins look so AH-MAZING, Danielle! Double chocolate+greet yogurt, there is so much to love! I can have 3.4 of these beauties right away! 🙂

  11. Healthy Chocolate Muffins Recipe - Live Well Bake Often (19)

    Arpita@ The Gastronomic BongReply

    These SKINNY muffins surely did make me veryyy HAPPY.. they look gorgeous!! so moist and chocolatey.. Absolutely perfect! 😀

  12. Healthy Chocolate Muffins Recipe - Live Well Bake Often (20)

    MirReply

    No! No calories! Don’t wanna know!!! 🙂
    They look amazing, Danielle. I’ll eat them any morning happily!

  13. Healthy Chocolate Muffins Recipe - Live Well Bake Often (21)

    Ashley | The Recipe RebelReply

    Skinny chocolate things are the best kind!

  14. Healthy Chocolate Muffins Recipe - Live Well Bake Often (22)

    Gourmet GetawaysReply

    I love chocolate muffins!!! ESPECIALLY when they are skinny!
    Looking forward to trying them.
    Julie
    Gourmet Getaways

  15. Healthy Chocolate Muffins Recipe - Live Well Bake Often (23)

    Lisa | Chocolate Meets StrawberryReply

    Oh yum, these look so fantastic Danielle! I love the little tricks you have used to lighten them up. I’m a big fan of the applesauce trick, but I think Greek yoghurt and a tiny bit of oil sounds fantastic too! Looking forward to trying these 😀

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (24)

      DanielleReply

      Thank you so much, Lisa! 🙂

  16. Healthy Chocolate Muffins Recipe - Live Well Bake Often (25)

    KaraReply

    These are delicious! I made them as written except I added 1 extra teaspoon of vanilla. I made these as mini muffins which baked for 11-12 minutes, and I got 48 of them. These will be great to have in the freezer on days when I just need a little bite of chocolate! Thanks so much for sharing, I’m sure I’ll make these again and again!

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (26)

      DanielleReply

      So glad you liked the muffins, Kara! I love the idea of making mini muffins, I need to give that a try next time I make a batch!

  17. Healthy Chocolate Muffins Recipe - Live Well Bake Often (27)

    DeborahReply

    I made the muffins this morning. Used regular size chocolate chips, about 1/2 cup. Did not have whole wheat flour but will use next time. Turned out good; moist in the middle.

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (28)

      DanielleReply

      Glad to hear you liked the muffins, Deborah!

  18. Healthy Chocolate Muffins Recipe - Live Well Bake Often (29)

    EmilyReply

    Is there a way to lessen the sugar content by not adding the honey and adding something as a substitute? Thanks!

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (30)

      DanielleReply

      I havent tried substituting anything else for the honey in these muffins, so I’m not quite sure.

  19. Healthy Chocolate Muffins Recipe - Live Well Bake Often (31)

    JenniferReply

    Just made these tonight. Although they are amazing in many ways they weren’t really sweet at all, so it didn’t satisfy my sweet tooth.

    They were very easy to make, the only change I made was instead of a half cup of milk I went with a 1/4 cup of milk and a 1/4 cup of milk kefir (I had too much I needed to get used up). They are so tender and moist and clean up was a breeze!

    Although I would make these again, I might try a half cup of mini chocolate chips to help with adding just a touch more sweetness to help with my nasty cravings. Thanks so much for the recipe!

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (32)

      DanielleReply

      Hi, Jennifer! You could increase the sugar in the recipe some if you like. But I think adding more chocolate chips like you mentioned may help too 🙂

  20. Healthy Chocolate Muffins Recipe - Live Well Bake Often (33)

    BellReply

    I actually swapped out the flour for 1 cup of coconut flour and 1/2 of wholemeal flour and 3/4 cup of plain greek yoghurt, you could still do a full cup of yoghurt, i just didn’t have it. I was worried about the thickness of the batter but they baked out perfectly and taste exactly like a classic Australian leamington. Really happy with these.

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (34)

      DanielleReply

      Glad you enjoyed the muffins!

      • Healthy Chocolate Muffins Recipe - Live Well Bake Often (35)

        AltheaReply

        Hi
        For the skinny chocolate muffins, can I use the all purpose coconut sugar instead of the light brown sugar?
        I await your reply

        Althea Kerr

        • Healthy Chocolate Muffins Recipe - Live Well Bake Often (36)

          DanielleReply

          Yes, that’s fine!

  21. Healthy Chocolate Muffins Recipe - Live Well Bake Often (37)

    JeanzenReply

    Hi Daniella, Can I use all purpose flour for this recipe? Also, we don’t have greek yoghurt around here. Is there any substitute for yoghurt? thanks

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (38)

      DanielleReply

      All-purpose flour would be fine. You can substitute the Greek yogurt with sour cream.

  22. Healthy Chocolate Muffins Recipe - Live Well Bake Often (39)

    EmReply

    I’m about to make these for the third time and I want to thank you for the great recipe. I double it, make them in a big muffin tin, freeze some, and eat them warmed in the morning with yogurt and banana. They also work well with substitutions.

  23. Healthy Chocolate Muffins Recipe - Live Well Bake Often (40)

    Elizabeth AmmonsReply

    Hi, is the batter supposed to be really thick? Mine came out super thick and the muffins didn’t rise or anything. Did I do something wrong??

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (41)

      DanielleReply

      It will be kind of thick, but the muffins should rise. Did you make any adjustments to the recipe?

  24. Healthy Chocolate Muffins Recipe - Live Well Bake Often (42)

    LovilletteReply

    What can i use intead of yogurt?

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (43)

      DanielleReply

      You could try sour cream or something with a similar consistency.

  25. Healthy Chocolate Muffins Recipe - Live Well Bake Often (44)

    susanReply

    hi, i’d like to know how many grams for the yogurt in this recipe? as there are lots of differences in conversions from cup to gram.
    thank you.

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (45)

      DanielleReply

      I just added the gram measurements for all of the ingredients to the recipe 🙂

  26. Healthy Chocolate Muffins Recipe - Live Well Bake Often (46)

    CynthiaReply

    I made these tonight Danielle. Love, love, love!!!

  27. Healthy Chocolate Muffins Recipe - Live Well Bake Often (47)

    Althea KerrReply

    When you say to use whole white wheat flour, is that plain or self raising flour?

    2nd question
    Is it better using the scales to weigh the items? or is it better using the measuring cups?

    • Healthy Chocolate Muffins Recipe - Live Well Bake Often (48)

      DanielleReply

      It’s plain flour not self rising. Using a scale will be the most accurate measurement, but cups work fine too.

Healthy Chocolate Muffins Recipe - Live Well Bake Often (2024)

FAQs

What is the secret to high muffins? ›

Chilling your muffin batter overnight in the fridge is the BEST thing you can do for amazing muffins. It makes them more moist, tender, and TALLER! It's very similar to chilling cookie dough, which if you know me you know I'm obsessed with chilling cookie dough.

Are chocolate muffins good for you? ›

Eating double chocolate muffins is as good as going to the gym (proof: the antioxidants in cocoa trigger the walls of your blood vessels to relax, lowering blood pressure and improving circulation. This means better delivery of oxygen and nutrients to every cell).

What is the most important rule to follow when baking muffins? ›

The number one rule for successful muffins is: Don't over-mix the batter. Use a rubber spatula to quickly fold (gently stir) the liquid ingredients into the dry ones. A few streaks of flour still showing is okay, especially if you plan to add in extra ingredients like fruits and nuts.

What does adding an extra egg do to muffins? ›

Using too few eggs will make your desserts dense, but using too many will make them rubbery. The explanation for this lies in the fact that eggs are made up of protein. As Fine Cooking explains, when the protein in eggs combines with the protein in flour, they produce the overall structure of the baked good.

How can I improve my muffins? ›

Here are a dozen tips and test-kitchen insights that home bakers can use to build “better-for-you” muffins that taste great.
  1. Downsize the portions. ...
  2. Go whole on the grains. ...
  3. Slash the sugar. ...
  4. Pour on the oil. ...
  5. Bring out the nuts. ...
  6. Switch from grains to beans and bean flours. ...
  7. Scale back the salt.

Is it OK to eat a chocolate muffin everyday? ›

Now muffins aren't all bad. These things are only unhealthy if eaten on a regular basis. If every so often you want a muffin for breakfast or a snack, that's no big deal. When you grab a bakery muffin for breakfast daily, that's when you increase your risk for unwanted weight gain and other health issues.

Can I eat a chocolate muffin every day? ›

Anything can fit into your daily calories, it's when you go over that you start to gain weight. Enjoy your muffins everyday but make sure you're not eating too much altogether! Consuming one chocolate muffin daily can contribute to an increase in calorie intake, potentially hindering weight loss efforts.

Are chocolate muffins healthier than cupcakes? ›

Cupcake recipes generally contain much higher levels of sugar and fat. This makes cupcakes sweeter, and juicier with finer crumbs. Muffins usually have fruit, nuts, and other ingredients mixed into the batter to compensate. Because of this, muffins are usually considered healthier than cupcakes.

What are some mistakes to avoid when making muffins? ›

12 Muffin-Making Mistakes And How To Avoid Them
  1. Mistake: Over-Mixing The Batter. ...
  2. Mistake: Not Preheating The Oven. ...
  3. Mistake: Filling The Muffin Cups Too Much. ...
  4. Mistake: Leaving The Muffins In The Pan Too Long. ...
  5. Mistake: Not Preparing The Pan Properly. ...
  6. Mistake: Using Milk Instead Of Water In Store-Bought Mixes.
Jan 7, 2024

What is the most common flaw when baking muffins? ›

Overmixing is a common problem with muffins. First combine dry ingredients, mixing well. Then combine liquid ingredients, mixing well. Finally combine dry and wet ingredients, by hand, using only 15 to 20 light strokes.

What sugar is better for muffins? ›

Demerara sugar: A less-processed version of granulated sugar, Demerara sugar contains some molasses, making it similar to brown sugar in taste, while in texture it's more like sanding sugar, coarser and with larger granules, making it an excellent finishing sugar for topping cakes, quick breads, and muffins before ...

What makes a muffin healthy or unhealthy? ›

What Makes a Healthy Muffin? Signs of a healthy muffin recipe are whole-food ingredients like fruit, veggies, nuts, seeds, eggs, and low-fat milk and yogurt (or a dairy-free alternative).

What is a natural sweetener for muffins? ›

Here are our top six sugar substitutes when it comes to baking:
  1. Coconut sugar. Play video. ...
  2. Agave nectar or agave syrup. Play video. ...
  3. Fruit concentrates. Unlike fruit juice, which has added sugar, fruit concentrate is basically fruit with the water removed. ...
  4. Maple syrup. ...
  5. Molasses.
Dec 29, 2020

How to get high dome on muffins? ›

bake at high temperature initially

High heat encourages the muffins to rise quickly and create a nice dome. You can start baking them at a higher temperature, such as 425°F (220°C), for about 5 minutes, and then lower the temperature to the regular baking temperature for the remaining time.

How do you keep muffins moist and fluffy? ›

If you're hoping to create extra moist muffins or aren't going to eat them for a while, consider using paper liners instead. Paper liners will help keep the moisture inside of the baked goods, allowing the muffins to remain fresher for longer.

Why are my muffins dense and not fluffy? ›

Too much liquid – If there is too much liquid in the batter, the muffins will be very dense.

How to get cupcakes to rise higher? ›

My Must Have Cupcake Tip: Bake at an initial high heat.

Fill your cupcake liners 3/4 full. Bake at 400 F for the first five minutes. Then lower the temperature to 350F for the remainder of the baking time. That first initial blast of heat will cause the tops of the cupcakes to puff up.

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